Gene : evm_27.TU.AmTr_v1.0_scaffold00021.166 A. trichopoda v1.0
Defline:  (1 of 1) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  165
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.166 Secondary Identifier:  ? PAC:31563379
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.166 0.5kb upstream 0.5kb upstream 3365 true AmTr_v1.0_scaffold00021: 3688771-3692135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 3691636-3692135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 0.5kb downstream 0.5kb downstream 3365 true AmTr_v1.0_scaffold00021: 3688271-3691635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 3688271-3688770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 1.0kb upstream 1.0kb upstream 3865 true AmTr_v1.0_scaffold00021: 3688771-3692635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 3691636-3692635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 1.0kb downstream 1.0kb downstream 3865 true AmTr_v1.0_scaffold00021: 3687771-3691635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 3687771-3688770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 2.0kb upstream 2.0kb upstream 4865 true AmTr_v1.0_scaffold00021: 3688771-3693635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 3691636-3693635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 2.0kb downstream 2.0kb downstream 4865 true AmTr_v1.0_scaffold00021: 3686771-3691635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 3686771-3688770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 5.0kb upstream 5.0kb upstream 7865 true AmTr_v1.0_scaffold00021: 3688771-3696635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 3691636-3696635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 5.0kb downstream 5.0kb downstream 7865 true AmTr_v1.0_scaffold00021: 3683771-3691635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 3683771-3688770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 10.0kb upstream 10.0kb upstream 12865 true AmTr_v1.0_scaffold00021: 3688771-3701635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 3691636-3701635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 10.0kb downstream 10.0kb downstream 12865 true AmTr_v1.0_scaffold00021: 3678771-3691635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.166 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 3678771-3688770 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain