Gene : evm_27.TU.AmTr_v1.0_scaffold00021.216 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  215
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.216 Secondary Identifier:  ? PAC:31563377
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYCOGENSYNTH-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-622 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.216 0.5kb upstream 0.5kb upstream 13547 true AmTr_v1.0_scaffold00021: 4650633-4664179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 4663680-4664179 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 0.5kb downstream 0.5kb downstream 13547 true AmTr_v1.0_scaffold00021: 4650133-4663679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 4650133-4650632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 1.0kb upstream 1.0kb upstream 14047 true AmTr_v1.0_scaffold00021: 4650633-4664679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 4663680-4664679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 1.0kb downstream 1.0kb downstream 14047 true AmTr_v1.0_scaffold00021: 4649633-4663679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 4649633-4650632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 2.0kb upstream 2.0kb upstream 15047 true AmTr_v1.0_scaffold00021: 4650633-4665679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 4663680-4665679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 2.0kb downstream 2.0kb downstream 15047 true AmTr_v1.0_scaffold00021: 4648633-4663679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 4648633-4650632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 5.0kb upstream 5.0kb upstream 18047 true AmTr_v1.0_scaffold00021: 4650633-4668679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 4663680-4668679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 5.0kb downstream 5.0kb downstream 18047 true AmTr_v1.0_scaffold00021: 4645633-4663679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 4645633-4650632 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 10.0kb upstream 10.0kb upstream 23047 true AmTr_v1.0_scaffold00021: 4650633-4673679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 4663680-4673679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 10.0kb downstream 10.0kb downstream 23047 true AmTr_v1.0_scaffold00021: 4640633-4663679 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.216 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 4640633-4650632 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain