Gene : evm_27.TU.AmTr_v1.0_scaffold00021.196 A. trichopoda v1.0
Defline:  (1 of 2) PF09341 - Transcription factor Pcc1 (Pcc1) Genomic Order:  195
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.196 Secondary Identifier:  ? PAC:31563256
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.196 0.5kb upstream 0.5kb upstream 3677 true AmTr_v1.0_scaffold00021: 4290853-4294529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 4290853-4291352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 0.5kb downstream 0.5kb downstream 3677 true AmTr_v1.0_scaffold00021: 4291353-4295029 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 4294530-4295029 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 1.0kb upstream 1.0kb upstream 4177 true AmTr_v1.0_scaffold00021: 4290353-4294529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 4290353-4291352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 1.0kb downstream 1.0kb downstream 4177 true AmTr_v1.0_scaffold00021: 4291353-4295529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 4294530-4295529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 2.0kb upstream 2.0kb upstream 5177 true AmTr_v1.0_scaffold00021: 4289353-4294529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 4289353-4291352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 2.0kb downstream 2.0kb downstream 5177 true AmTr_v1.0_scaffold00021: 4291353-4296529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 4294530-4296529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 5.0kb upstream 5.0kb upstream 8177 true AmTr_v1.0_scaffold00021: 4286353-4294529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 4286353-4291352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 5.0kb downstream 5.0kb downstream 8177 true AmTr_v1.0_scaffold00021: 4291353-4299529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 4294530-4299529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 10.0kb upstream 10.0kb upstream 13177 true AmTr_v1.0_scaffold00021: 4281353-4294529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 4281353-4291352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 10.0kb downstream 10.0kb downstream 13177 true AmTr_v1.0_scaffold00021: 4291353-4304529 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.196 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 4294530-4304529 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain