Gene : evm_27.TU.AmTr_v1.0_scaffold00020.105 A. trichopoda v1.0
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  105
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00020.105 Secondary Identifier:  ? PAC:31554678
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00020.105 0.5kb upstream 0.5kb upstream 24828 true AmTr_v1.0_scaffold00020: 5125488-5150315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00020: 5125488-5125987 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 0.5kb downstream 0.5kb downstream 24828 true AmTr_v1.0_scaffold00020: 5125988-5150815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00020: 5150316-5150815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 1.0kb upstream 1.0kb upstream 25328 true AmTr_v1.0_scaffold00020: 5124988-5150315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00020: 5124988-5125987 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 1.0kb downstream 1.0kb downstream 25328 true AmTr_v1.0_scaffold00020: 5125988-5151315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00020: 5150316-5151315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 2.0kb upstream 2.0kb upstream 26328 true AmTr_v1.0_scaffold00020: 5123988-5150315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00020: 5123988-5125987 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 2.0kb downstream 2.0kb downstream 26328 true AmTr_v1.0_scaffold00020: 5125988-5152315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00020: 5150316-5152315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 5.0kb upstream 5.0kb upstream 29328 true AmTr_v1.0_scaffold00020: 5120988-5150315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00020: 5120988-5125987 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 5.0kb downstream 5.0kb downstream 29328 true AmTr_v1.0_scaffold00020: 5125988-5155315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00020: 5150316-5155315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 10.0kb upstream 10.0kb upstream 34328 true AmTr_v1.0_scaffold00020: 5115988-5150315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00020: 5115988-5125987 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 10.0kb downstream 10.0kb downstream 34328 true AmTr_v1.0_scaffold00020: 5125988-5160315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00020.105 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00020: 5150316-5160315 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain