Gene : evm_27.TU.AmTr_v1.0_scaffold00019.81 A. trichopoda v1.0
Defline:  (1 of 2) PTHR27001:SF217 - PROTEIN NSP-INTERACTING KINASE 1 Genomic Order:  79
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.81 Secondary Identifier:  ? PAC:31572285
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.81 0.5kb upstream 0.5kb upstream 7779 true AmTr_v1.0_scaffold00019: 1266162-1273940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 1273441-1273940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 0.5kb downstream 0.5kb downstream 7779 true AmTr_v1.0_scaffold00019: 1265662-1273440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 1265662-1266161 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 1.0kb upstream 1.0kb upstream 8279 true AmTr_v1.0_scaffold00019: 1266162-1274440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 1273441-1274440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 1.0kb downstream 1.0kb downstream 8279 true AmTr_v1.0_scaffold00019: 1265162-1273440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 1265162-1266161 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 2.0kb upstream 2.0kb upstream 9279 true AmTr_v1.0_scaffold00019: 1266162-1275440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 1273441-1275440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 2.0kb downstream 2.0kb downstream 9279 true AmTr_v1.0_scaffold00019: 1264162-1273440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 1264162-1266161 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 5.0kb upstream 5.0kb upstream 12279 true AmTr_v1.0_scaffold00019: 1266162-1278440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 1273441-1278440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 5.0kb downstream 5.0kb downstream 12279 true AmTr_v1.0_scaffold00019: 1261162-1273440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 1261162-1266161 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 10.0kb upstream 10.0kb upstream 17279 true AmTr_v1.0_scaffold00019: 1266162-1283440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 1273441-1283440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 10.0kb downstream 10.0kb downstream 17279 true AmTr_v1.0_scaffold00019: 1256162-1273440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.81 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 1256162-1266161 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain