Gene : evm_27.TU.AmTr_v1.0_scaffold00019.76 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11227:SF17 - AUTOPHAGY-SPECIFIC GENE 18, ISOFORM E Genomic Order:  74
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.76 Secondary Identifier:  ? PAC:31571924
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.76 0.5kb upstream 0.5kb upstream 8323 true AmTr_v1.0_scaffold00019: 1220882-1229204 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 1228705-1229204 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 0.5kb downstream 0.5kb downstream 8323 true AmTr_v1.0_scaffold00019: 1220382-1228704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 1220382-1220881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 1.0kb upstream 1.0kb upstream 8823 true AmTr_v1.0_scaffold00019: 1220882-1229704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 1228705-1229704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 1.0kb downstream 1.0kb downstream 8823 true AmTr_v1.0_scaffold00019: 1219882-1228704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 1219882-1220881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 2.0kb upstream 2.0kb upstream 9823 true AmTr_v1.0_scaffold00019: 1220882-1230704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 1228705-1230704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 2.0kb downstream 2.0kb downstream 9823 true AmTr_v1.0_scaffold00019: 1218882-1228704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 1218882-1220881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 5.0kb upstream 5.0kb upstream 12823 true AmTr_v1.0_scaffold00019: 1220882-1233704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 1228705-1233704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 5.0kb downstream 5.0kb downstream 12823 true AmTr_v1.0_scaffold00019: 1215882-1228704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 1215882-1220881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 10.0kb upstream 10.0kb upstream 17823 true AmTr_v1.0_scaffold00019: 1220882-1238704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 1228705-1238704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 10.0kb downstream 10.0kb downstream 17823 true AmTr_v1.0_scaffold00019: 1210882-1228704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.76 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 1210882-1220881 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046109 5273 Angiosperm View MSA
121345292 5274 Embryophyte View MSA
123426742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain