Gene : evm_27.TU.AmTr_v1.0_scaffold00019.73 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  71
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.73 Secondary Identifier:  ? PAC:31572177
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda ANAGLYCOLYSIS-PWY Amborella trichopoda pathologic  
Atrichopoda GLUCOSE1PMETAB-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-621 Amborella trichopoda pathologic  
Atrichopoda PWY-7238 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.73 0.5kb upstream 0.5kb upstream 7483 true AmTr_v1.0_scaffold00019: 1188325-1195807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 1195308-1195807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 0.5kb downstream 0.5kb downstream 7483 true AmTr_v1.0_scaffold00019: 1187825-1195307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 1187825-1188324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 1.0kb upstream 1.0kb upstream 7983 true AmTr_v1.0_scaffold00019: 1188325-1196307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 1195308-1196307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 1.0kb downstream 1.0kb downstream 7983 true AmTr_v1.0_scaffold00019: 1187325-1195307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 1187325-1188324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 2.0kb upstream 2.0kb upstream 8983 true AmTr_v1.0_scaffold00019: 1188325-1197307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 1195308-1197307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 2.0kb downstream 2.0kb downstream 8983 true AmTr_v1.0_scaffold00019: 1186325-1195307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 1186325-1188324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 5.0kb upstream 5.0kb upstream 11983 true AmTr_v1.0_scaffold00019: 1188325-1200307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 1195308-1200307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 5.0kb downstream 5.0kb downstream 11983 true AmTr_v1.0_scaffold00019: 1183325-1195307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 1183325-1188324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 10.0kb upstream 10.0kb upstream 16983 true AmTr_v1.0_scaffold00019: 1188325-1205307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 1195308-1205307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 10.0kb downstream 10.0kb downstream 16983 true AmTr_v1.0_scaffold00019: 1178325-1195307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.73 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 1178325-1188324 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain