Gene : evm_27.TU.AmTr_v1.0_scaffold00019.47 A. trichopoda v1.0

Defline:  (1 of 1) PTHR19315:SF9 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 Genomic Order:  45
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.47 Secondary Identifier:  ? PAC:31571968

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.47 0.5kb upstream 0.5kb upstream 6806 true AmTr_v1.0_scaffold00019: 718695-725500 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 725001-725500 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 0.5kb downstream 0.5kb downstream 6806 true AmTr_v1.0_scaffold00019: 718195-725000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 718195-718694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 1.0kb upstream 1.0kb upstream 7306 true AmTr_v1.0_scaffold00019: 718695-726000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 725001-726000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 1.0kb downstream 1.0kb downstream 7306 true AmTr_v1.0_scaffold00019: 717695-725000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 717695-718694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 2.0kb upstream 2.0kb upstream 8306 true AmTr_v1.0_scaffold00019: 718695-727000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 725001-727000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 2.0kb downstream 2.0kb downstream 8306 true AmTr_v1.0_scaffold00019: 716695-725000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 716695-718694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 5.0kb upstream 5.0kb upstream 11306 true AmTr_v1.0_scaffold00019: 718695-730000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 725001-730000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 5.0kb downstream 5.0kb downstream 11306 true AmTr_v1.0_scaffold00019: 713695-725000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 713695-718694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 10.0kb upstream 10.0kb upstream 16306 true AmTr_v1.0_scaffold00019: 718695-735000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 725001-735000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 10.0kb downstream 10.0kb downstream 16306 true AmTr_v1.0_scaffold00019: 708695-725000 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.47 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 708695-718694 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041246 5273 Angiosperm View MSA
121345382 5274 Embryophyte View MSA
123423823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain