Gene : evm_27.TU.AmTr_v1.0_scaffold00023.190 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  184
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00023.190 Secondary Identifier:  ? PAC:31573710
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00023.190 0.5kb upstream 0.5kb upstream 19578 true AmTr_v1.0_scaffold00023: 5071334-5090911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00023: 5071334-5071833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 0.5kb downstream 0.5kb downstream 19578 true AmTr_v1.0_scaffold00023: 5071834-5091411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00023: 5090912-5091411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 1.0kb upstream 1.0kb upstream 20078 true AmTr_v1.0_scaffold00023: 5070834-5090911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00023: 5070834-5071833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 1.0kb downstream 1.0kb downstream 20078 true AmTr_v1.0_scaffold00023: 5071834-5091911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00023: 5090912-5091911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 2.0kb upstream 2.0kb upstream 21078 true AmTr_v1.0_scaffold00023: 5069834-5090911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00023: 5069834-5071833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 2.0kb downstream 2.0kb downstream 21078 true AmTr_v1.0_scaffold00023: 5071834-5092911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00023: 5090912-5092911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 5.0kb upstream 5.0kb upstream 24078 true AmTr_v1.0_scaffold00023: 5066834-5090911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00023: 5066834-5071833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 5.0kb downstream 5.0kb downstream 24078 true AmTr_v1.0_scaffold00023: 5071834-5095911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00023: 5090912-5095911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 10.0kb upstream 10.0kb upstream 29078 true AmTr_v1.0_scaffold00023: 5061834-5090911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00023: 5061834-5071833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 10.0kb downstream 10.0kb downstream 29078 true AmTr_v1.0_scaffold00023: 5071834-5100911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00023.190 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00023: 5090912-5100911 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044126 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121347187 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain