Gene : evm_27.TU.AmTr_v1.0_scaffold00022.400 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10543:SF37 - CAROTENOID 9,10(9',10')-CLEAVAGE DIOXYGENASE 1 Genomic Order:  396
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.400 Secondary Identifier:  ? PAC:31552315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.400 0.5kb upstream 0.5kb upstream 11886 true AmTr_v1.0_scaffold00022: 6677167-6689052 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 6688553-6689052 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 0.5kb downstream 0.5kb downstream 11886 true AmTr_v1.0_scaffold00022: 6676667-6688552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 6676667-6677166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 1.0kb upstream 1.0kb upstream 12386 true AmTr_v1.0_scaffold00022: 6677167-6689552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 6688553-6689552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 1.0kb downstream 1.0kb downstream 12386 true AmTr_v1.0_scaffold00022: 6676167-6688552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 6676167-6677166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 2.0kb upstream 2.0kb upstream 13386 true AmTr_v1.0_scaffold00022: 6677167-6690552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 6688553-6690552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 2.0kb downstream 2.0kb downstream 13386 true AmTr_v1.0_scaffold00022: 6675167-6688552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 6675167-6677166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 5.0kb upstream 5.0kb upstream 16386 true AmTr_v1.0_scaffold00022: 6677167-6693552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 6688553-6693552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 5.0kb downstream 5.0kb downstream 16386 true AmTr_v1.0_scaffold00022: 6672167-6688552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 6672167-6677166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 10.0kb upstream 10.0kb upstream 21386 true AmTr_v1.0_scaffold00022: 6677167-6698552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 6688553-6698552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 10.0kb downstream 10.0kb downstream 21386 true AmTr_v1.0_scaffold00022: 6667167-6688552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.400 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 6667167-6677166 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain