Gene : evm_27.TU.AmTr_v1.0_scaffold00022.371 A. trichopoda v1.0

Genomic Order:  368 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.371
Secondary Identifier:  ? PAC:31552510

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.371 0.5kb upstream 0.5kb upstream 5044 true AmTr_v1.0_scaffold00022: 6115651-6120694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 6115651-6116150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 0.5kb downstream 0.5kb downstream 5044 true AmTr_v1.0_scaffold00022: 6116151-6121194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 6120695-6121194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 1.0kb upstream 1.0kb upstream 5544 true AmTr_v1.0_scaffold00022: 6115151-6120694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 6115151-6116150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 1.0kb downstream 1.0kb downstream 5544 true AmTr_v1.0_scaffold00022: 6116151-6121694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 6120695-6121694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 2.0kb upstream 2.0kb upstream 6544 true AmTr_v1.0_scaffold00022: 6114151-6120694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 6114151-6116150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 2.0kb downstream 2.0kb downstream 6544 true AmTr_v1.0_scaffold00022: 6116151-6122694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 6120695-6122694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 5.0kb upstream 5.0kb upstream 9544 true AmTr_v1.0_scaffold00022: 6111151-6120694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 6111151-6116150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 5.0kb downstream 5.0kb downstream 9544 true AmTr_v1.0_scaffold00022: 6116151-6125694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 6120695-6125694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 10.0kb upstream 10.0kb upstream 14544 true AmTr_v1.0_scaffold00022: 6106151-6120694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 6106151-6116150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 10.0kb downstream 10.0kb downstream 14544 true AmTr_v1.0_scaffold00022: 6116151-6130694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.371 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 6120695-6130694 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain