Gene : evm_27.TU.AmTr_v1.0_scaffold00022.78 A. trichopoda v1.0
Defline:  (1 of 4) PF05055 - Protein of unknown function (DUF677) Genomic Order:  76
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.78 Secondary Identifier:  ? PAC:31552439
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.78 0.5kb upstream 0.5kb upstream 1649 true AmTr_v1.0_scaffold00022: 1154609-1156257 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 1155758-1156257 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 0.5kb downstream 0.5kb downstream 1649 true AmTr_v1.0_scaffold00022: 1154109-1155757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 1154109-1154608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 1.0kb upstream 1.0kb upstream 2149 true AmTr_v1.0_scaffold00022: 1154609-1156757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 1155758-1156757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 1.0kb downstream 1.0kb downstream 2149 true AmTr_v1.0_scaffold00022: 1153609-1155757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 1153609-1154608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 2.0kb upstream 2.0kb upstream 3149 true AmTr_v1.0_scaffold00022: 1154609-1157757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 1155758-1157757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 2.0kb downstream 2.0kb downstream 3149 true AmTr_v1.0_scaffold00022: 1152609-1155757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 1152609-1154608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 5.0kb upstream 5.0kb upstream 6149 true AmTr_v1.0_scaffold00022: 1154609-1160757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 1155758-1160757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 5.0kb downstream 5.0kb downstream 6149 true AmTr_v1.0_scaffold00022: 1149609-1155757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 1149609-1154608 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 10.0kb upstream 10.0kb upstream 11149 true AmTr_v1.0_scaffold00022: 1154609-1165757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 1155758-1165757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 10.0kb downstream 10.0kb downstream 11149 true AmTr_v1.0_scaffold00022: 1144609-1155757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.78 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 1144609-1154608 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain