Gene : evm_27.TU.AmTr_v1.0_scaffold00022.66 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13301//PTHR13301:SF73 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  64
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.66 Secondary Identifier:  ? PAC:31552398
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1001 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.66 0.5kb upstream 0.5kb upstream 8262 true AmTr_v1.0_scaffold00022: 987433-995694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 987433-987932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 0.5kb downstream 0.5kb downstream 8262 true AmTr_v1.0_scaffold00022: 987933-996194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 995695-996194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 1.0kb upstream 1.0kb upstream 8762 true AmTr_v1.0_scaffold00022: 986933-995694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 986933-987932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 1.0kb downstream 1.0kb downstream 8762 true AmTr_v1.0_scaffold00022: 987933-996694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 995695-996694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 2.0kb upstream 2.0kb upstream 9762 true AmTr_v1.0_scaffold00022: 985933-995694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 985933-987932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 2.0kb downstream 2.0kb downstream 9762 true AmTr_v1.0_scaffold00022: 987933-997694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 995695-997694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 5.0kb upstream 5.0kb upstream 12762 true AmTr_v1.0_scaffold00022: 982933-995694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 982933-987932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 5.0kb downstream 5.0kb downstream 12762 true AmTr_v1.0_scaffold00022: 987933-1000694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 995695-1000694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 10.0kb upstream 10.0kb upstream 17762 true AmTr_v1.0_scaffold00022: 977933-995694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 977933-987932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 10.0kb downstream 10.0kb downstream 17762 true AmTr_v1.0_scaffold00022: 987933-1005694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.66 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 995695-1005694 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain