Gene : evm_27.TU.AmTr_v1.0_scaffold00022.244 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  242
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.244 Secondary Identifier:  ? PAC:31552427
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5409 Amborella trichopoda pathologic  
Atrichopoda PWY-5410 Amborella trichopoda pathologic  
Atrichopoda PWY-735 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.244 0.5kb upstream 0.5kb upstream 902 true AmTr_v1.0_scaffold00022: 3943152-3944053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 3943554-3944053 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 0.5kb downstream 0.5kb downstream 902 true AmTr_v1.0_scaffold00022: 3942652-3943553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 3942652-3943151 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 1.0kb upstream 1.0kb upstream 1402 true AmTr_v1.0_scaffold00022: 3943152-3944553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 3943554-3944553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 1.0kb downstream 1.0kb downstream 1402 true AmTr_v1.0_scaffold00022: 3942152-3943553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 3942152-3943151 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 2.0kb upstream 2.0kb upstream 2402 true AmTr_v1.0_scaffold00022: 3943152-3945553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 3943554-3945553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 2.0kb downstream 2.0kb downstream 2402 true AmTr_v1.0_scaffold00022: 3941152-3943553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 3941152-3943151 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 5.0kb upstream 5.0kb upstream 5402 true AmTr_v1.0_scaffold00022: 3943152-3948553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 3943554-3948553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 5.0kb downstream 5.0kb downstream 5402 true AmTr_v1.0_scaffold00022: 3938152-3943553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 3938152-3943151 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 10.0kb upstream 10.0kb upstream 10402 true AmTr_v1.0_scaffold00022: 3943152-3953553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 3943554-3953553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 10.0kb downstream 10.0kb downstream 10402 true AmTr_v1.0_scaffold00022: 3933152-3943553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.244 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 3933152-3943151 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain