Gene : evm_27.TU.AmTr_v1.0_scaffold00022.339 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  337
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.339 Secondary Identifier:  ? PAC:31552567
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.339 0.5kb upstream 0.5kb upstream 4948 true AmTr_v1.0_scaffold00022: 5514900-5519847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 5514900-5515399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 0.5kb downstream 0.5kb downstream 4948 true AmTr_v1.0_scaffold00022: 5515400-5520347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 5519848-5520347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 1.0kb upstream 1.0kb upstream 5448 true AmTr_v1.0_scaffold00022: 5514400-5519847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 5514400-5515399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 1.0kb downstream 1.0kb downstream 5448 true AmTr_v1.0_scaffold00022: 5515400-5520847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 5519848-5520847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 2.0kb upstream 2.0kb upstream 6448 true AmTr_v1.0_scaffold00022: 5513400-5519847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 5513400-5515399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 2.0kb downstream 2.0kb downstream 6448 true AmTr_v1.0_scaffold00022: 5515400-5521847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 5519848-5521847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 5.0kb upstream 5.0kb upstream 9448 true AmTr_v1.0_scaffold00022: 5510400-5519847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 5510400-5515399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 5.0kb downstream 5.0kb downstream 9448 true AmTr_v1.0_scaffold00022: 5515400-5524847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 5519848-5524847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 10.0kb upstream 10.0kb upstream 14448 true AmTr_v1.0_scaffold00022: 5505400-5519847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 5505400-5515399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 10.0kb downstream 10.0kb downstream 14448 true AmTr_v1.0_scaffold00022: 5515400-5529847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.339 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 5519848-5529847 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain