Gene : evm_27.TU.AmTr_v1.0_scaffold00022.141 A. trichopoda v1.0
Defline:  (1 of 4) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  139
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.141 Secondary Identifier:  ? PAC:31552344
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5188 Amborella trichopoda pathologic  
Atrichopoda PWY-5918 Amborella trichopoda pathologic  
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.141 0.5kb upstream 0.5kb upstream 8056 true AmTr_v1.0_scaffold00022: 2130350-2138405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 2137906-2138405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 0.5kb downstream 0.5kb downstream 8056 true AmTr_v1.0_scaffold00022: 2129850-2137905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 2129850-2130349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 1.0kb upstream 1.0kb upstream 8556 true AmTr_v1.0_scaffold00022: 2130350-2138905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 2137906-2138905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 1.0kb downstream 1.0kb downstream 8556 true AmTr_v1.0_scaffold00022: 2129350-2137905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 2129350-2130349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 2.0kb upstream 2.0kb upstream 9556 true AmTr_v1.0_scaffold00022: 2130350-2139905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 2137906-2139905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 2.0kb downstream 2.0kb downstream 9556 true AmTr_v1.0_scaffold00022: 2128350-2137905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 2128350-2130349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 5.0kb upstream 5.0kb upstream 12556 true AmTr_v1.0_scaffold00022: 2130350-2142905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 2137906-2142905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 5.0kb downstream 5.0kb downstream 12556 true AmTr_v1.0_scaffold00022: 2125350-2137905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 2125350-2130349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 10.0kb upstream 10.0kb upstream 17556 true AmTr_v1.0_scaffold00022: 2130350-2147905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 2137906-2147905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 10.0kb downstream 10.0kb downstream 17556 true AmTr_v1.0_scaffold00022: 2120350-2137905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.141 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 2120350-2130349 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain