Gene : evm_27.TU.AmTr_v1.0_scaffold00022.113 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  111
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00022.113 Secondary Identifier:  ? PAC:31552497
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00022.113 0.5kb upstream 0.5kb upstream 1817 true AmTr_v1.0_scaffold00022: 1599732-1601548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00022: 1601049-1601548 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 0.5kb downstream 0.5kb downstream 1817 true AmTr_v1.0_scaffold00022: 1599232-1601048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00022: 1599232-1599731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 1.0kb upstream 1.0kb upstream 2317 true AmTr_v1.0_scaffold00022: 1599732-1602048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00022: 1601049-1602048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 1.0kb downstream 1.0kb downstream 2317 true AmTr_v1.0_scaffold00022: 1598732-1601048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00022: 1598732-1599731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 2.0kb upstream 2.0kb upstream 3317 true AmTr_v1.0_scaffold00022: 1599732-1603048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00022: 1601049-1603048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 2.0kb downstream 2.0kb downstream 3317 true AmTr_v1.0_scaffold00022: 1597732-1601048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00022: 1597732-1599731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 5.0kb upstream 5.0kb upstream 6317 true AmTr_v1.0_scaffold00022: 1599732-1606048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00022: 1601049-1606048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 5.0kb downstream 5.0kb downstream 6317 true AmTr_v1.0_scaffold00022: 1594732-1601048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00022: 1594732-1599731 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 10.0kb upstream 10.0kb upstream 11317 true AmTr_v1.0_scaffold00022: 1599732-1611048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00022: 1601049-1611048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 10.0kb downstream 10.0kb downstream 11317 true AmTr_v1.0_scaffold00022: 1589732-1601048 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00022.113 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00022: 1589732-1599731 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain