Gene : evm_27.TU.AmTr_v1.0_scaffold00025.109 A. trichopoda v1.0

Defline:  (1 of 4) 3.1.1.23 - Acylglycerol lipase / Monoacylglycerol lipase Genomic Order:  109
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.109 Secondary Identifier:  ? PAC:31566638

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda LIPAS-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-7420 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.109 0.5kb upstream 0.5kb upstream 19909 true AmTr_v1.0_scaffold00025: 1545254-1565162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 1564663-1565162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 0.5kb downstream 0.5kb downstream 19909 true AmTr_v1.0_scaffold00025: 1544754-1564662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 1544754-1545253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 1.0kb upstream 1.0kb upstream 20409 true AmTr_v1.0_scaffold00025: 1545254-1565662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 1564663-1565662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 1.0kb downstream 1.0kb downstream 20409 true AmTr_v1.0_scaffold00025: 1544254-1564662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 1544254-1545253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 2.0kb upstream 2.0kb upstream 21409 true AmTr_v1.0_scaffold00025: 1545254-1566662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 1564663-1566662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 2.0kb downstream 2.0kb downstream 21409 true AmTr_v1.0_scaffold00025: 1543254-1564662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 1543254-1545253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 5.0kb upstream 5.0kb upstream 24409 true AmTr_v1.0_scaffold00025: 1545254-1569662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 1564663-1569662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 5.0kb downstream 5.0kb downstream 24409 true AmTr_v1.0_scaffold00025: 1540254-1564662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 1540254-1545253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 10.0kb upstream 10.0kb upstream 29409 true AmTr_v1.0_scaffold00025: 1545254-1574662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 1564663-1574662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 10.0kb downstream 10.0kb downstream 29409 true AmTr_v1.0_scaffold00025: 1535254-1564662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.109 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 1535254-1545253 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain