Gene : evm_27.TU.AmTr_v1.0_scaffold00025.131 A. trichopoda v1.0
Defline:  (1 of 1) PTHR28554:SF1 - 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL Genomic Order:  131
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.131 Secondary Identifier:  ? PAC:31566626
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.131 0.5kb upstream 0.5kb upstream 6938 true AmTr_v1.0_scaffold00025: 1822472-1829409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 1828910-1829409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 0.5kb downstream 0.5kb downstream 6938 true AmTr_v1.0_scaffold00025: 1821972-1828909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 1821972-1822471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 1.0kb upstream 1.0kb upstream 7438 true AmTr_v1.0_scaffold00025: 1822472-1829909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 1828910-1829909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 1.0kb downstream 1.0kb downstream 7438 true AmTr_v1.0_scaffold00025: 1821472-1828909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 1821472-1822471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 2.0kb upstream 2.0kb upstream 8438 true AmTr_v1.0_scaffold00025: 1822472-1830909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 1828910-1830909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 2.0kb downstream 2.0kb downstream 8438 true AmTr_v1.0_scaffold00025: 1820472-1828909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 1820472-1822471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 5.0kb upstream 5.0kb upstream 11438 true AmTr_v1.0_scaffold00025: 1822472-1833909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 1828910-1833909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 5.0kb downstream 5.0kb downstream 11438 true AmTr_v1.0_scaffold00025: 1817472-1828909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 1817472-1822471 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 10.0kb upstream 10.0kb upstream 16438 true AmTr_v1.0_scaffold00025: 1822472-1838909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 1828910-1838909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 10.0kb downstream 10.0kb downstream 16438 true AmTr_v1.0_scaffold00025: 1812472-1828909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.131 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 1812472-1822471 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain