Gene : evm_27.TU.AmTr_v1.0_scaffold00024.177 A. trichopoda v1.0
Defline:  (1 of 3) PTHR10362//PTHR10362:SF18 - HISTIDINE AMMONIA-LYASE Genomic Order:  174
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00024.177 Secondary Identifier:  ? PAC:31558692
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1121 Amborella trichopoda pathologic  
Atrichopoda PWY1F-467 Amborella trichopoda pathologic  
Atrichopoda PWY-7186 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00024.177 0.5kb upstream 0.5kb upstream 2779 true AmTr_v1.0_scaffold00024: 3739272-3742050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00024: 3739272-3739771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 0.5kb downstream 0.5kb downstream 2779 true AmTr_v1.0_scaffold00024: 3739772-3742550 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00024: 3742051-3742550 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 1.0kb upstream 1.0kb upstream 3279 true AmTr_v1.0_scaffold00024: 3738772-3742050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00024: 3738772-3739771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 1.0kb downstream 1.0kb downstream 3279 true AmTr_v1.0_scaffold00024: 3739772-3743050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00024: 3742051-3743050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 2.0kb upstream 2.0kb upstream 4279 true AmTr_v1.0_scaffold00024: 3737772-3742050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00024: 3737772-3739771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 2.0kb downstream 2.0kb downstream 4279 true AmTr_v1.0_scaffold00024: 3739772-3744050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00024: 3742051-3744050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 5.0kb upstream 5.0kb upstream 7279 true AmTr_v1.0_scaffold00024: 3734772-3742050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00024: 3734772-3739771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 5.0kb downstream 5.0kb downstream 7279 true AmTr_v1.0_scaffold00024: 3739772-3747050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00024: 3742051-3747050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 10.0kb upstream 10.0kb upstream 12279 true AmTr_v1.0_scaffold00024: 3729772-3742050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00024: 3729772-3739771 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 10.0kb downstream 10.0kb downstream 12279 true AmTr_v1.0_scaffold00024: 3739772-3752050 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.177 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00024: 3742051-3752050 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050365 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain