Gene : evm_27.TU.AmTr_v1.0_scaffold00024.116 A. trichopoda v1.0
Defline:  (1 of 1) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  114
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00024.116 Secondary Identifier:  ? PAC:31558519
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00024.116 0.5kb upstream 0.5kb upstream 15255 true AmTr_v1.0_scaffold00024: 2477833-2493087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00024: 2477833-2478332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 0.5kb downstream 0.5kb downstream 15255 true AmTr_v1.0_scaffold00024: 2478333-2493587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00024: 2493088-2493587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 1.0kb upstream 1.0kb upstream 15755 true AmTr_v1.0_scaffold00024: 2477333-2493087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00024: 2477333-2478332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 1.0kb downstream 1.0kb downstream 15755 true AmTr_v1.0_scaffold00024: 2478333-2494087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00024: 2493088-2494087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 2.0kb upstream 2.0kb upstream 16755 true AmTr_v1.0_scaffold00024: 2476333-2493087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00024: 2476333-2478332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 2.0kb downstream 2.0kb downstream 16755 true AmTr_v1.0_scaffold00024: 2478333-2495087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00024: 2493088-2495087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 5.0kb upstream 5.0kb upstream 19755 true AmTr_v1.0_scaffold00024: 2473333-2493087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00024: 2473333-2478332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 5.0kb downstream 5.0kb downstream 19755 true AmTr_v1.0_scaffold00024: 2478333-2498087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00024: 2493088-2498087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 10.0kb upstream 10.0kb upstream 24755 true AmTr_v1.0_scaffold00024: 2468333-2493087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00024: 2468333-2478332 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 10.0kb downstream 10.0kb downstream 24755 true AmTr_v1.0_scaffold00024: 2478333-2503087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00024.116 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00024: 2493088-2503087 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain