Gene : evm_27.TU.AmTr_v1.0_scaffold00026.21 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  20
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00026.21 Secondary Identifier:  ? PAC:31554067
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ASPARTATE-DEG1-PWY Amborella trichopoda pathologic  
Atrichopoda ASPARTATESYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3001 Amborella trichopoda pathologic  
Atrichopoda PWY-7115 Amborella trichopoda pathologic  
Atrichopoda PWY-7117 Amborella trichopoda pathologic  
Atrichopoda THRESYN-PWY Amborella trichopoda pathologic  

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00026.21 0.5kb upstream 0.5kb upstream 11996 true AmTr_v1.0_scaffold00026: 674780-686775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00026: 674780-675279 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 0.5kb downstream 0.5kb downstream 11996 true AmTr_v1.0_scaffold00026: 675280-687275 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00026: 686776-687275 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 1.0kb upstream 1.0kb upstream 12496 true AmTr_v1.0_scaffold00026: 674280-686775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00026: 674280-675279 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 1.0kb downstream 1.0kb downstream 12496 true AmTr_v1.0_scaffold00026: 675280-687775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00026: 686776-687775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 2.0kb upstream 2.0kb upstream 13496 true AmTr_v1.0_scaffold00026: 673280-686775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00026: 673280-675279 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 2.0kb downstream 2.0kb downstream 13496 true AmTr_v1.0_scaffold00026: 675280-688775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00026: 686776-688775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 5.0kb upstream 5.0kb upstream 16496 true AmTr_v1.0_scaffold00026: 670280-686775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00026: 670280-675279 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 5.0kb downstream 5.0kb downstream 16496 true AmTr_v1.0_scaffold00026: 675280-691775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00026: 686776-691775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 10.0kb upstream 10.0kb upstream 21496 true AmTr_v1.0_scaffold00026: 665280-686775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00026: 665280-675279 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 10.0kb downstream 10.0kb downstream 21496 true AmTr_v1.0_scaffold00026: 675280-696775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00026.21 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00026: 686776-696775 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain