Gene : evm_27.TU.AmTr_v1.0_scaffold00025.320 A. trichopoda v1.0
Defline:  (1 of 5) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  320
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.320 Secondary Identifier:  ? PAC:31566693
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.320 0.5kb upstream 0.5kb upstream 6901 true AmTr_v1.0_scaffold00025: 4733819-4740719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 4733819-4734318 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 0.5kb downstream 0.5kb downstream 6901 true AmTr_v1.0_scaffold00025: 4734319-4741219 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 4740720-4741219 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 1.0kb upstream 1.0kb upstream 7401 true AmTr_v1.0_scaffold00025: 4733319-4740719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 4733319-4734318 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 1.0kb downstream 1.0kb downstream 7401 true AmTr_v1.0_scaffold00025: 4734319-4741719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 4740720-4741719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 2.0kb upstream 2.0kb upstream 8401 true AmTr_v1.0_scaffold00025: 4732319-4740719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 4732319-4734318 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 2.0kb downstream 2.0kb downstream 8401 true AmTr_v1.0_scaffold00025: 4734319-4742719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 4740720-4742719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 5.0kb upstream 5.0kb upstream 11401 true AmTr_v1.0_scaffold00025: 4729319-4740719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 4729319-4734318 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 5.0kb downstream 5.0kb downstream 11401 true AmTr_v1.0_scaffold00025: 4734319-4745719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 4740720-4745719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 10.0kb upstream 10.0kb upstream 16401 true AmTr_v1.0_scaffold00025: 4724319-4740719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 4724319-4734318 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 10.0kb downstream 10.0kb downstream 16401 true AmTr_v1.0_scaffold00025: 4734319-4750719 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.320 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 4740720-4750719 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050370 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain