Gene : evm_27.TU.AmTr_v1.0_scaffold00025.290 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12526//PTHR12526:SF392 - GLYCOSYLTRANSFERASE Genomic Order:  290
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.290 Secondary Identifier:  ? PAC:31566636
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYCOGENSYNTH-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-622 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.290 0.5kb upstream 0.5kb upstream 11724 true AmTr_v1.0_scaffold00025: 4238785-4250508 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 4250009-4250508 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 0.5kb downstream 0.5kb downstream 11724 true AmTr_v1.0_scaffold00025: 4238285-4250008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 4238285-4238784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 1.0kb upstream 1.0kb upstream 12224 true AmTr_v1.0_scaffold00025: 4238785-4251008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 4250009-4251008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 1.0kb downstream 1.0kb downstream 12224 true AmTr_v1.0_scaffold00025: 4237785-4250008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 4237785-4238784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 2.0kb upstream 2.0kb upstream 13224 true AmTr_v1.0_scaffold00025: 4238785-4252008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 4250009-4252008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 2.0kb downstream 2.0kb downstream 13224 true AmTr_v1.0_scaffold00025: 4236785-4250008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 4236785-4238784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 5.0kb upstream 5.0kb upstream 16224 true AmTr_v1.0_scaffold00025: 4238785-4255008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 4250009-4255008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 5.0kb downstream 5.0kb downstream 16224 true AmTr_v1.0_scaffold00025: 4233785-4250008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 4233785-4238784 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 10.0kb upstream 10.0kb upstream 21224 true AmTr_v1.0_scaffold00025: 4238785-4260008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 4250009-4260008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 10.0kb downstream 10.0kb downstream 21224 true AmTr_v1.0_scaffold00025: 4228785-4250008 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.290 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 4228785-4238784 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049203 5273 Angiosperm View MSA
121349172 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain