Gene : evm_27.TU.AmTr_v1.0_scaffold00025.291 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Genomic Order:  291
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.291 Secondary Identifier:  ? PAC:31566440
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.291 0.5kb upstream 0.5kb upstream 5167 true AmTr_v1.0_scaffold00025: 4258050-4263216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 4258050-4258549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 0.5kb downstream 0.5kb downstream 5167 true AmTr_v1.0_scaffold00025: 4258550-4263716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 4263217-4263716 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 1.0kb upstream 1.0kb upstream 5667 true AmTr_v1.0_scaffold00025: 4257550-4263216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 4257550-4258549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 1.0kb downstream 1.0kb downstream 5667 true AmTr_v1.0_scaffold00025: 4258550-4264216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 4263217-4264216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 2.0kb upstream 2.0kb upstream 6667 true AmTr_v1.0_scaffold00025: 4256550-4263216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 4256550-4258549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 2.0kb downstream 2.0kb downstream 6667 true AmTr_v1.0_scaffold00025: 4258550-4265216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 4263217-4265216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 5.0kb upstream 5.0kb upstream 9667 true AmTr_v1.0_scaffold00025: 4253550-4263216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 4253550-4258549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 5.0kb downstream 5.0kb downstream 9667 true AmTr_v1.0_scaffold00025: 4258550-4268216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 4263217-4268216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 10.0kb upstream 10.0kb upstream 14667 true AmTr_v1.0_scaffold00025: 4248550-4263216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 4248550-4258549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 10.0kb downstream 10.0kb downstream 14667 true AmTr_v1.0_scaffold00025: 4258550-4273216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.291 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 4263217-4273216 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain