Gene : evm_27.TU.AmTr_v1.0_scaffold00025.279 A. trichopoda v1.0
Defline:  (1 of 1) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  279
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.279 Secondary Identifier:  ? PAC:31566682
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-2541 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.279 0.5kb upstream 0.5kb upstream 16473 true AmTr_v1.0_scaffold00025: 4077933-4094405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 4077933-4078432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 0.5kb downstream 0.5kb downstream 16473 true AmTr_v1.0_scaffold00025: 4078433-4094905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 4094406-4094905 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 1.0kb upstream 1.0kb upstream 16973 true AmTr_v1.0_scaffold00025: 4077433-4094405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 4077433-4078432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 1.0kb downstream 1.0kb downstream 16973 true AmTr_v1.0_scaffold00025: 4078433-4095405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 4094406-4095405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 2.0kb upstream 2.0kb upstream 17973 true AmTr_v1.0_scaffold00025: 4076433-4094405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 4076433-4078432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 2.0kb downstream 2.0kb downstream 17973 true AmTr_v1.0_scaffold00025: 4078433-4096405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 4094406-4096405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 5.0kb upstream 5.0kb upstream 20973 true AmTr_v1.0_scaffold00025: 4073433-4094405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 4073433-4078432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 5.0kb downstream 5.0kb downstream 20973 true AmTr_v1.0_scaffold00025: 4078433-4099405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 4094406-4099405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 10.0kb upstream 10.0kb upstream 25973 true AmTr_v1.0_scaffold00025: 4068433-4094405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 4068433-4078432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 10.0kb downstream 10.0kb downstream 25973 true AmTr_v1.0_scaffold00025: 4078433-4104405 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.279 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 4094406-4104405 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain