Gene : evm_27.TU.AmTr_v1.0_scaffold00025.336 A. trichopoda v1.0

Genomic Order:  336 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.336
Secondary Identifier:  ? PAC:31566326

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.336 0.5kb upstream 0.5kb upstream 2269 true AmTr_v1.0_scaffold00025: 4991130-4993398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 4992899-4993398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 0.5kb downstream 0.5kb downstream 2269 true AmTr_v1.0_scaffold00025: 4990630-4992898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 4990630-4991129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 1.0kb upstream 1.0kb upstream 2769 true AmTr_v1.0_scaffold00025: 4991130-4993898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 4992899-4993898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 1.0kb downstream 1.0kb downstream 2769 true AmTr_v1.0_scaffold00025: 4990130-4992898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 4990130-4991129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 2.0kb upstream 2.0kb upstream 3769 true AmTr_v1.0_scaffold00025: 4991130-4994898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 4992899-4994898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 2.0kb downstream 2.0kb downstream 3769 true AmTr_v1.0_scaffold00025: 4989130-4992898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 4989130-4991129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 5.0kb upstream 5.0kb upstream 6769 true AmTr_v1.0_scaffold00025: 4991130-4997898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 4992899-4997898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 5.0kb downstream 5.0kb downstream 6769 true AmTr_v1.0_scaffold00025: 4986130-4992898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 4986130-4991129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 10.0kb upstream 10.0kb upstream 11769 true AmTr_v1.0_scaffold00025: 4991130-5002898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 4992899-5002898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 10.0kb downstream 10.0kb downstream 11769 true AmTr_v1.0_scaffold00025: 4981130-4992898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.336 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 4981130-4991129 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051130 5273 Angiosperm View MSA
121349570 5274 Embryophyte View MSA
123425322 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain