Gene : evm_27.TU.AmTr_v1.0_scaffold00025.221 A. trichopoda v1.0
Defline:  (1 of 5) PF00428 - 60s Acidic ribosomal protein (Ribosomal_60s) Genomic Order:  221
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.221 Secondary Identifier:  ? PAC:31566323
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.221 0.5kb upstream 0.5kb upstream 3780 true AmTr_v1.0_scaffold00025: 3098185-3101964 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 3101465-3101964 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 0.5kb downstream 0.5kb downstream 3780 true AmTr_v1.0_scaffold00025: 3097685-3101464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 3097685-3098184 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 1.0kb upstream 1.0kb upstream 4280 true AmTr_v1.0_scaffold00025: 3098185-3102464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 3101465-3102464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 1.0kb downstream 1.0kb downstream 4280 true AmTr_v1.0_scaffold00025: 3097185-3101464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 3097185-3098184 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 2.0kb upstream 2.0kb upstream 5280 true AmTr_v1.0_scaffold00025: 3098185-3103464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 3101465-3103464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 2.0kb downstream 2.0kb downstream 5280 true AmTr_v1.0_scaffold00025: 3096185-3101464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 3096185-3098184 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 5.0kb upstream 5.0kb upstream 8280 true AmTr_v1.0_scaffold00025: 3098185-3106464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 3101465-3106464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 5.0kb downstream 5.0kb downstream 8280 true AmTr_v1.0_scaffold00025: 3093185-3101464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 3093185-3098184 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 10.0kb upstream 10.0kb upstream 13280 true AmTr_v1.0_scaffold00025: 3098185-3111464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 3101465-3111464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 10.0kb downstream 10.0kb downstream 13280 true AmTr_v1.0_scaffold00025: 3088185-3101464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.221 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 3088185-3098184 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain