Gene : evm_27.TU.AmTr_v1.0_scaffold00025.206 A. trichopoda v1.0
Defline:  (1 of 41) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  206
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.206 Secondary Identifier:  ? PAC:31566642
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.206 0.5kb upstream 0.5kb upstream 3521 true AmTr_v1.0_scaffold00025: 2787475-2790995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 2787475-2787974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 0.5kb downstream 0.5kb downstream 3521 true AmTr_v1.0_scaffold00025: 2787975-2791495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 2790996-2791495 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 1.0kb upstream 1.0kb upstream 4021 true AmTr_v1.0_scaffold00025: 2786975-2790995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 2786975-2787974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 1.0kb downstream 1.0kb downstream 4021 true AmTr_v1.0_scaffold00025: 2787975-2791995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 2790996-2791995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 2.0kb upstream 2.0kb upstream 5021 true AmTr_v1.0_scaffold00025: 2785975-2790995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 2785975-2787974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 2.0kb downstream 2.0kb downstream 5021 true AmTr_v1.0_scaffold00025: 2787975-2792995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 2790996-2792995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 5.0kb upstream 5.0kb upstream 8021 true AmTr_v1.0_scaffold00025: 2782975-2790995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 2782975-2787974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 5.0kb downstream 5.0kb downstream 8021 true AmTr_v1.0_scaffold00025: 2787975-2795995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 2790996-2795995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 10.0kb upstream 10.0kb upstream 13021 true AmTr_v1.0_scaffold00025: 2777975-2790995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 2777975-2787974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 10.0kb downstream 10.0kb downstream 13021 true AmTr_v1.0_scaffold00025: 2787975-2800995 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.206 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 2790996-2800995 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045085 5273 Angiosperm View MSA
121310395 5274 Embryophyte View MSA
123347889 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain