Gene : evm_27.TU.AmTr_v1.0_scaffold00025.194 A. trichopoda v1.0

Defline:  (1 of 1) KOG3419 - Mitochondrial/chloroplast ribosomal protein S16 Genomic Order:  194
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.194 Secondary Identifier:  ? PAC:31566709

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.194 0.5kb upstream 0.5kb upstream 5379 true AmTr_v1.0_scaffold00025: 2637384-2642762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 2637384-2637883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 0.5kb downstream 0.5kb downstream 5379 true AmTr_v1.0_scaffold00025: 2637884-2643262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 2642763-2643262 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 1.0kb upstream 1.0kb upstream 5879 true AmTr_v1.0_scaffold00025: 2636884-2642762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 2636884-2637883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 1.0kb downstream 1.0kb downstream 5879 true AmTr_v1.0_scaffold00025: 2637884-2643762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 2642763-2643762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 2.0kb upstream 2.0kb upstream 6879 true AmTr_v1.0_scaffold00025: 2635884-2642762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 2635884-2637883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 2.0kb downstream 2.0kb downstream 6879 true AmTr_v1.0_scaffold00025: 2637884-2644762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 2642763-2644762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 5.0kb upstream 5.0kb upstream 9879 true AmTr_v1.0_scaffold00025: 2632884-2642762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 2632884-2637883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 5.0kb downstream 5.0kb downstream 9879 true AmTr_v1.0_scaffold00025: 2637884-2647762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 2642763-2647762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 10.0kb upstream 10.0kb upstream 14879 true AmTr_v1.0_scaffold00025: 2627884-2642762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 2627884-2637883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 10.0kb downstream 10.0kb downstream 14879 true AmTr_v1.0_scaffold00025: 2637884-2652762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.194 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 2642763-2652762 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain