Gene : evm_27.TU.AmTr_v1.0_scaffold00025.253 A. trichopoda v1.0
Defline:  (1 of 1) KOG0174 - 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3 Genomic Order:  253
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.253 Secondary Identifier:  ? PAC:31566535
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.253 0.5kb upstream 0.5kb upstream 15463 true AmTr_v1.0_scaffold00025: 3669398-3684860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 3684361-3684860 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 0.5kb downstream 0.5kb downstream 15463 true AmTr_v1.0_scaffold00025: 3668898-3684360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 3668898-3669397 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 1.0kb upstream 1.0kb upstream 15963 true AmTr_v1.0_scaffold00025: 3669398-3685360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 3684361-3685360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 1.0kb downstream 1.0kb downstream 15963 true AmTr_v1.0_scaffold00025: 3668398-3684360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 3668398-3669397 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 2.0kb upstream 2.0kb upstream 16963 true AmTr_v1.0_scaffold00025: 3669398-3686360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 3684361-3686360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 2.0kb downstream 2.0kb downstream 16963 true AmTr_v1.0_scaffold00025: 3667398-3684360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 3667398-3669397 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 5.0kb upstream 5.0kb upstream 19963 true AmTr_v1.0_scaffold00025: 3669398-3689360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 3684361-3689360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 5.0kb downstream 5.0kb downstream 19963 true AmTr_v1.0_scaffold00025: 3664398-3684360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 3664398-3669397 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 10.0kb upstream 10.0kb upstream 24963 true AmTr_v1.0_scaffold00025: 3669398-3694360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 3684361-3694360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 10.0kb downstream 10.0kb downstream 24963 true AmTr_v1.0_scaffold00025: 3659398-3684360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.253 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 3659398-3669397 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain