Gene : evm_27.TU.AmTr_v1.0_scaffold00025.251 A. trichopoda v1.0
Defline:  (1 of 6) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  251
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00025.251 Secondary Identifier:  ? PAC:31566337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00025.251 0.5kb upstream 0.5kb upstream 7637 true AmTr_v1.0_scaffold00025: 3642793-3650429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00025: 3642793-3643292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 0.5kb downstream 0.5kb downstream 7637 true AmTr_v1.0_scaffold00025: 3643293-3650929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00025: 3650430-3650929 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 1.0kb upstream 1.0kb upstream 8137 true AmTr_v1.0_scaffold00025: 3642293-3650429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00025: 3642293-3643292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 1.0kb downstream 1.0kb downstream 8137 true AmTr_v1.0_scaffold00025: 3643293-3651429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00025: 3650430-3651429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 2.0kb upstream 2.0kb upstream 9137 true AmTr_v1.0_scaffold00025: 3641293-3650429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00025: 3641293-3643292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 2.0kb downstream 2.0kb downstream 9137 true AmTr_v1.0_scaffold00025: 3643293-3652429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00025: 3650430-3652429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 5.0kb upstream 5.0kb upstream 12137 true AmTr_v1.0_scaffold00025: 3638293-3650429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00025: 3638293-3643292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 5.0kb downstream 5.0kb downstream 12137 true AmTr_v1.0_scaffold00025: 3643293-3655429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00025: 3650430-3655429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 10.0kb upstream 10.0kb upstream 17137 true AmTr_v1.0_scaffold00025: 3633293-3650429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00025: 3633293-3643292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 10.0kb downstream 10.0kb downstream 17137 true AmTr_v1.0_scaffold00025: 3643293-3660429 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00025.251 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00025: 3650430-3660429 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain