Gene : evm_27.TU.AmTr_v1.0_scaffold00029.345 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12982 - PHOSPHATIDYLINOSITOL GLYCAN, CLASS C Genomic Order:  345
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.345 Secondary Identifier:  ? PAC:31549865
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.345 0.5kb upstream 0.5kb upstream 1960 true AmTr_v1.0_scaffold00029: 4626632-4628591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 4626632-4627131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 0.5kb downstream 0.5kb downstream 1960 true AmTr_v1.0_scaffold00029: 4627132-4629091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 4628592-4629091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 1.0kb upstream 1.0kb upstream 2460 true AmTr_v1.0_scaffold00029: 4626132-4628591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 4626132-4627131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 1.0kb downstream 1.0kb downstream 2460 true AmTr_v1.0_scaffold00029: 4627132-4629591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 4628592-4629591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 2.0kb upstream 2.0kb upstream 3460 true AmTr_v1.0_scaffold00029: 4625132-4628591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 4625132-4627131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 2.0kb downstream 2.0kb downstream 3460 true AmTr_v1.0_scaffold00029: 4627132-4630591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 4628592-4630591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 5.0kb upstream 5.0kb upstream 6460 true AmTr_v1.0_scaffold00029: 4622132-4628591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 4622132-4627131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 5.0kb downstream 5.0kb downstream 6460 true AmTr_v1.0_scaffold00029: 4627132-4633591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 4628592-4633591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 10.0kb upstream 10.0kb upstream 11460 true AmTr_v1.0_scaffold00029: 4617132-4628591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 4617132-4627131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 10.0kb downstream 10.0kb downstream 11460 true AmTr_v1.0_scaffold00029: 4627132-4638591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.345 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 4628592-4638591 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041331 5273 Angiosperm View MSA
121345489 5274 Embryophyte View MSA
123426053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain