Gene : evm_27.TU.AmTr_v1.0_scaffold00029.331 A. trichopoda v1.0
Defline:  (1 of 1) PF01434//PF06480//PF07724 - Peptidase family M41 (Peptidase_M41) // FtsH Extracellular (FtsH_ext) // AAA domain (Cdc48 subfamily) (AAA_2) Genomic Order:  331
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.331 Secondary Identifier:  ? PAC:31549710
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.331 0.5kb upstream 0.5kb upstream 15725 true AmTr_v1.0_scaffold00029: 4402422-4418146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 4402422-4402921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 0.5kb downstream 0.5kb downstream 15725 true AmTr_v1.0_scaffold00029: 4402922-4418646 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 4418147-4418646 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 1.0kb upstream 1.0kb upstream 16225 true AmTr_v1.0_scaffold00029: 4401922-4418146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 4401922-4402921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 1.0kb downstream 1.0kb downstream 16225 true AmTr_v1.0_scaffold00029: 4402922-4419146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 4418147-4419146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 2.0kb upstream 2.0kb upstream 17225 true AmTr_v1.0_scaffold00029: 4400922-4418146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 4400922-4402921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 2.0kb downstream 2.0kb downstream 17225 true AmTr_v1.0_scaffold00029: 4402922-4420146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 4418147-4420146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 5.0kb upstream 5.0kb upstream 20225 true AmTr_v1.0_scaffold00029: 4397922-4418146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 4397922-4402921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 5.0kb downstream 5.0kb downstream 20225 true AmTr_v1.0_scaffold00029: 4402922-4423146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 4418147-4423146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 10.0kb upstream 10.0kb upstream 25225 true AmTr_v1.0_scaffold00029: 4392922-4418146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 4392922-4402921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 10.0kb downstream 10.0kb downstream 25225 true AmTr_v1.0_scaffold00029: 4402922-4428146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.331 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 4418147-4428146 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain