Gene : evm_27.TU.AmTr_v1.0_scaffold00029.405 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Genomic Order:  405
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.405 Secondary Identifier:  ? PAC:31549854
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.405 0.5kb upstream 0.5kb upstream 5057 true AmTr_v1.0_scaffold00029: 5491682-5496738 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 5496239-5496738 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 0.5kb downstream 0.5kb downstream 5057 true AmTr_v1.0_scaffold00029: 5491182-5496238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 5491182-5491681 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 1.0kb upstream 1.0kb upstream 5557 true AmTr_v1.0_scaffold00029: 5491682-5497238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 5496239-5497238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 1.0kb downstream 1.0kb downstream 5557 true AmTr_v1.0_scaffold00029: 5490682-5496238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 5490682-5491681 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 2.0kb upstream 2.0kb upstream 6557 true AmTr_v1.0_scaffold00029: 5491682-5498238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 5496239-5498238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 2.0kb downstream 2.0kb downstream 6557 true AmTr_v1.0_scaffold00029: 5489682-5496238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 5489682-5491681 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 5.0kb upstream 5.0kb upstream 9557 true AmTr_v1.0_scaffold00029: 5491682-5501238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 5496239-5501238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 5.0kb downstream 5.0kb downstream 9557 true AmTr_v1.0_scaffold00029: 5486682-5496238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 5486682-5491681 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 10.0kb upstream 10.0kb upstream 14557 true AmTr_v1.0_scaffold00029: 5491682-5506238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 5496239-5506238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 10.0kb downstream 10.0kb downstream 14557 true AmTr_v1.0_scaffold00029: 5481682-5496238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.405 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 5481682-5491681 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044716 5273 Angiosperm View MSA
121345249 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain