Gene : evm_27.TU.AmTr_v1.0_scaffold00029.115 A. trichopoda v1.0
Defline:  (1 of 24) PF03000 - NPH3 family (NPH3) Genomic Order:  115
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.115 Secondary Identifier:  ? PAC:31550053
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.115 0.5kb upstream 0.5kb upstream 5586 true AmTr_v1.0_scaffold00029: 1380068-1385653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 1380068-1380567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 0.5kb downstream 0.5kb downstream 5586 true AmTr_v1.0_scaffold00029: 1380568-1386153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 1385654-1386153 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 1.0kb upstream 1.0kb upstream 6086 true AmTr_v1.0_scaffold00029: 1379568-1385653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 1379568-1380567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 1.0kb downstream 1.0kb downstream 6086 true AmTr_v1.0_scaffold00029: 1380568-1386653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 1385654-1386653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 2.0kb upstream 2.0kb upstream 7086 true AmTr_v1.0_scaffold00029: 1378568-1385653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 1378568-1380567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 2.0kb downstream 2.0kb downstream 7086 true AmTr_v1.0_scaffold00029: 1380568-1387653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 1385654-1387653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 5.0kb upstream 5.0kb upstream 10086 true AmTr_v1.0_scaffold00029: 1375568-1385653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 1375568-1380567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 5.0kb downstream 5.0kb downstream 10086 true AmTr_v1.0_scaffold00029: 1380568-1390653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 1385654-1390653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 10.0kb upstream 10.0kb upstream 15086 true AmTr_v1.0_scaffold00029: 1370568-1385653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 1370568-1380567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 10.0kb downstream 10.0kb downstream 15086 true AmTr_v1.0_scaffold00029: 1380568-1395653 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.115 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 1385654-1395653 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain