Gene : evm_27.TU.AmTr_v1.0_scaffold00029.159 A. trichopoda v1.0
Defline:  (1 of 1) PF15072 - Domain of unknown function (DUF4539) (DUF4539) Genomic Order:  159
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.159 Secondary Identifier:  ? PAC:31549807
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.159 0.5kb upstream 0.5kb upstream 6125 true AmTr_v1.0_scaffold00029: 1951453-1957577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 1957078-1957577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 0.5kb downstream 0.5kb downstream 6125 true AmTr_v1.0_scaffold00029: 1950953-1957077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 1950953-1951452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 1.0kb upstream 1.0kb upstream 6625 true AmTr_v1.0_scaffold00029: 1951453-1958077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 1957078-1958077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 1.0kb downstream 1.0kb downstream 6625 true AmTr_v1.0_scaffold00029: 1950453-1957077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 1950453-1951452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 2.0kb upstream 2.0kb upstream 7625 true AmTr_v1.0_scaffold00029: 1951453-1959077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 1957078-1959077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 2.0kb downstream 2.0kb downstream 7625 true AmTr_v1.0_scaffold00029: 1949453-1957077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 1949453-1951452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 5.0kb upstream 5.0kb upstream 10625 true AmTr_v1.0_scaffold00029: 1951453-1962077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 1957078-1962077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 5.0kb downstream 5.0kb downstream 10625 true AmTr_v1.0_scaffold00029: 1946453-1957077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 1946453-1951452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 10.0kb upstream 10.0kb upstream 15625 true AmTr_v1.0_scaffold00029: 1951453-1967077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 1957078-1967077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 10.0kb downstream 10.0kb downstream 15625 true AmTr_v1.0_scaffold00029: 1941453-1957077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.159 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 1941453-1951452 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049874 5273 Angiosperm View MSA
121311625 5274 Embryophyte View MSA
123348898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain