Gene : evm_27.TU.AmTr_v1.0_scaffold00029.16 A. trichopoda v1.0
Defline:  (1 of 516) PF13041 - PPR repeat family (PPR_2) Genomic Order:  16
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.16 Secondary Identifier:  ? PAC:31549765
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.16 0.5kb upstream 0.5kb upstream 1565 true AmTr_v1.0_scaffold00029: 257690-259254 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 258755-259254 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 0.5kb downstream 0.5kb downstream 1565 true AmTr_v1.0_scaffold00029: 257190-258754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 257190-257689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 1.0kb upstream 1.0kb upstream 2065 true AmTr_v1.0_scaffold00029: 257690-259754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 258755-259754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 1.0kb downstream 1.0kb downstream 2065 true AmTr_v1.0_scaffold00029: 256690-258754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 256690-257689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 2.0kb upstream 2.0kb upstream 3065 true AmTr_v1.0_scaffold00029: 257690-260754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 258755-260754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 2.0kb downstream 2.0kb downstream 3065 true AmTr_v1.0_scaffold00029: 255690-258754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 255690-257689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 5.0kb upstream 5.0kb upstream 6065 true AmTr_v1.0_scaffold00029: 257690-263754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 258755-263754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 5.0kb downstream 5.0kb downstream 6065 true AmTr_v1.0_scaffold00029: 252690-258754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 252690-257689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 10.0kb upstream 10.0kb upstream 11065 true AmTr_v1.0_scaffold00029: 257690-268754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 258755-268754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 10.0kb downstream 10.0kb downstream 11065 true AmTr_v1.0_scaffold00029: 247690-258754 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 247690-257689 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain