Gene : evm_27.TU.AmTr_v1.0_scaffold00029.153 A. trichopoda v1.0
Defline:  (1 of 5) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  153
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.153 Secondary Identifier:  ? PAC:31549967
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.153 0.5kb upstream 0.5kb upstream 959 true AmTr_v1.0_scaffold00029: 1876866-1877824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 1877325-1877824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 0.5kb downstream 0.5kb downstream 959 true AmTr_v1.0_scaffold00029: 1876366-1877324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 1876366-1876865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 1.0kb upstream 1.0kb upstream 1459 true AmTr_v1.0_scaffold00029: 1876866-1878324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 1877325-1878324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 1.0kb downstream 1.0kb downstream 1459 true AmTr_v1.0_scaffold00029: 1875866-1877324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 1875866-1876865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 2.0kb upstream 2.0kb upstream 2459 true AmTr_v1.0_scaffold00029: 1876866-1879324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 1877325-1879324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 2.0kb downstream 2.0kb downstream 2459 true AmTr_v1.0_scaffold00029: 1874866-1877324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 1874866-1876865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 5.0kb upstream 5.0kb upstream 5459 true AmTr_v1.0_scaffold00029: 1876866-1882324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 1877325-1882324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 5.0kb downstream 5.0kb downstream 5459 true AmTr_v1.0_scaffold00029: 1871866-1877324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 1871866-1876865 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 10.0kb upstream 10.0kb upstream 10459 true AmTr_v1.0_scaffold00029: 1876866-1887324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 1877325-1887324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 10.0kb downstream 10.0kb downstream 10459 true AmTr_v1.0_scaffold00029: 1866866-1877324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.153 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 1866866-1876865 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain