Gene : evm_27.TU.AmTr_v1.0_scaffold00027.8 A. trichopoda v1.0
Defline:  (1 of 1) 6.5.1.2 - DNA ligase (NAD(+)) / Polynucleotide ligase (NAD+) Genomic Order:  8
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00027.8 Secondary Identifier:  ? PAC:31551644
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00027.8 0.5kb upstream 0.5kb upstream 14061 true AmTr_v1.0_scaffold00027: 515677-529737 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00027: 529238-529737 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 0.5kb downstream 0.5kb downstream 14061 true AmTr_v1.0_scaffold00027: 515177-529237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00027: 515177-515676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 1.0kb upstream 1.0kb upstream 14561 true AmTr_v1.0_scaffold00027: 515677-530237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00027: 529238-530237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 1.0kb downstream 1.0kb downstream 14561 true AmTr_v1.0_scaffold00027: 514677-529237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00027: 514677-515676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 2.0kb upstream 2.0kb upstream 15561 true AmTr_v1.0_scaffold00027: 515677-531237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00027: 529238-531237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 2.0kb downstream 2.0kb downstream 15561 true AmTr_v1.0_scaffold00027: 513677-529237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00027: 513677-515676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 5.0kb upstream 5.0kb upstream 18561 true AmTr_v1.0_scaffold00027: 515677-534237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00027: 529238-534237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 5.0kb downstream 5.0kb downstream 18561 true AmTr_v1.0_scaffold00027: 510677-529237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00027: 510677-515676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 10.0kb upstream 10.0kb upstream 23561 true AmTr_v1.0_scaffold00027: 515677-539237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00027: 529238-539237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 10.0kb downstream 10.0kb downstream 23561 true AmTr_v1.0_scaffold00027: 505677-529237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.8 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00027: 505677-515676 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045728 5273 Angiosperm View MSA
121344888 5274 Embryophyte View MSA
123427474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain