Gene : evm_27.TU.AmTr_v1.0_scaffold00027.5 A. trichopoda v1.0
Defline:  (1 of 2) PF13301 - Protein of unknown function (DUF4079) (DUF4079) Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00027.5 Secondary Identifier:  ? PAC:31551771
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00027.5 0.5kb upstream 0.5kb upstream 3482 true AmTr_v1.0_scaffold00027: 397934-401415 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00027: 400916-401415 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 0.5kb downstream 0.5kb downstream 3482 true AmTr_v1.0_scaffold00027: 397434-400915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00027: 397434-397933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 1.0kb upstream 1.0kb upstream 3982 true AmTr_v1.0_scaffold00027: 397934-401915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00027: 400916-401915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 1.0kb downstream 1.0kb downstream 3982 true AmTr_v1.0_scaffold00027: 396934-400915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00027: 396934-397933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 2.0kb upstream 2.0kb upstream 4982 true AmTr_v1.0_scaffold00027: 397934-402915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00027: 400916-402915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 2.0kb downstream 2.0kb downstream 4982 true AmTr_v1.0_scaffold00027: 395934-400915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00027: 395934-397933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 5.0kb upstream 5.0kb upstream 7982 true AmTr_v1.0_scaffold00027: 397934-405915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00027: 400916-405915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 5.0kb downstream 5.0kb downstream 7982 true AmTr_v1.0_scaffold00027: 392934-400915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00027: 392934-397933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 10.0kb upstream 10.0kb upstream 12982 true AmTr_v1.0_scaffold00027: 397934-410915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00027: 400916-410915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 10.0kb downstream 10.0kb downstream 12982 true AmTr_v1.0_scaffold00027: 387934-400915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00027.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00027: 387934-397933 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046542 5273 Angiosperm View MSA
121345670 5274 Embryophyte View MSA
123424562 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain