Gene : evm_27.TU.AmTr_v1.0_scaffold00028.16 A. trichopoda v1.0

Defline:  (1 of 1) PTHR11700:SF9 - 37S RIBOSOMAL PROTEIN S10, MITOCHONDRIAL Genomic Order:  16
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00028.16 Secondary Identifier:  ? PAC:31562075

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00028.16 0.5kb upstream 0.5kb upstream 812 true AmTr_v1.0_scaffold00028: 777640-778451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00028: 777952-778451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 0.5kb downstream 0.5kb downstream 812 true AmTr_v1.0_scaffold00028: 777140-777951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00028: 777140-777639 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 1.0kb upstream 1.0kb upstream 1312 true AmTr_v1.0_scaffold00028: 777640-778951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00028: 777952-778951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 1.0kb downstream 1.0kb downstream 1312 true AmTr_v1.0_scaffold00028: 776640-777951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00028: 776640-777639 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 2.0kb upstream 2.0kb upstream 2312 true AmTr_v1.0_scaffold00028: 777640-779951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00028: 777952-779951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 2.0kb downstream 2.0kb downstream 2312 true AmTr_v1.0_scaffold00028: 775640-777951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00028: 775640-777639 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 5.0kb upstream 5.0kb upstream 5312 true AmTr_v1.0_scaffold00028: 777640-782951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00028: 777952-782951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 5.0kb downstream 5.0kb downstream 5312 true AmTr_v1.0_scaffold00028: 772640-777951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00028: 772640-777639 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 10.0kb upstream 10.0kb upstream 10312 true AmTr_v1.0_scaffold00028: 777640-787951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00028: 777952-787951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 10.0kb downstream 10.0kb downstream 10312 true AmTr_v1.0_scaffold00028: 767640-777951 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00028: 767640-777639 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049945 5273 Angiosperm View MSA
121311659 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain