Gene : evm_27.TU.AmTr_v1.0_scaffold00028.104 A. trichopoda v1.0
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  102
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00028.104 Secondary Identifier:  ? PAC:31562073
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00028.104 0.5kb upstream 0.5kb upstream 18370 true AmTr_v1.0_scaffold00028: 4318743-4337112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00028: 4318743-4319242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 0.5kb downstream 0.5kb downstream 18370 true AmTr_v1.0_scaffold00028: 4319243-4337612 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00028: 4337113-4337612 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 1.0kb upstream 1.0kb upstream 18870 true AmTr_v1.0_scaffold00028: 4318243-4337112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00028: 4318243-4319242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 1.0kb downstream 1.0kb downstream 18870 true AmTr_v1.0_scaffold00028: 4319243-4338112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00028: 4337113-4338112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 2.0kb upstream 2.0kb upstream 19870 true AmTr_v1.0_scaffold00028: 4317243-4337112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00028: 4317243-4319242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 2.0kb downstream 2.0kb downstream 19870 true AmTr_v1.0_scaffold00028: 4319243-4339112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00028: 4337113-4339112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 5.0kb upstream 5.0kb upstream 22870 true AmTr_v1.0_scaffold00028: 4314243-4337112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00028: 4314243-4319242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 5.0kb downstream 5.0kb downstream 22870 true AmTr_v1.0_scaffold00028: 4319243-4342112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00028: 4337113-4342112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 10.0kb upstream 10.0kb upstream 27870 true AmTr_v1.0_scaffold00028: 4309243-4337112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00028: 4309243-4319242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 10.0kb downstream 10.0kb downstream 27870 true AmTr_v1.0_scaffold00028: 4319243-4347112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00028.104 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00028: 4337113-4347112 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain