Gene : evm_27.TU.AmTr_v1.0_scaffold00032.169 A. trichopoda v1.0
Defline:  (1 of 5) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  169
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.169 Secondary Identifier:  ? PAC:31560101
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.169 0.5kb upstream 0.5kb upstream 4041 true AmTr_v1.0_scaffold00032: 3301277-3305317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 3301277-3301776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 0.5kb downstream 0.5kb downstream 4041 true AmTr_v1.0_scaffold00032: 3301777-3305817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 3305318-3305817 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 1.0kb upstream 1.0kb upstream 4541 true AmTr_v1.0_scaffold00032: 3300777-3305317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 3300777-3301776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 1.0kb downstream 1.0kb downstream 4541 true AmTr_v1.0_scaffold00032: 3301777-3306317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 3305318-3306317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 2.0kb upstream 2.0kb upstream 5541 true AmTr_v1.0_scaffold00032: 3299777-3305317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 3299777-3301776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 2.0kb downstream 2.0kb downstream 5541 true AmTr_v1.0_scaffold00032: 3301777-3307317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 3305318-3307317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 5.0kb upstream 5.0kb upstream 8541 true AmTr_v1.0_scaffold00032: 3296777-3305317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 3296777-3301776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 5.0kb downstream 5.0kb downstream 8541 true AmTr_v1.0_scaffold00032: 3301777-3310317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 3305318-3310317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 10.0kb upstream 10.0kb upstream 13541 true AmTr_v1.0_scaffold00032: 3291777-3305317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 3291777-3301776 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 10.0kb downstream 10.0kb downstream 13541 true AmTr_v1.0_scaffold00032: 3301777-3315317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.169 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 3305318-3315317 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain