Gene : evm_27.TU.AmTr_v1.0_scaffold00032.239 A. trichopoda v1.0
Defline:  (1 of 1) PTHR15111 - RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 Genomic Order:  238
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.239 Secondary Identifier:  ? PAC:31560150
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.239 0.5kb upstream 0.5kb upstream 39264 true AmTr_v1.0_scaffold00032: 4693423-4732686 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 4732187-4732686 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 0.5kb downstream 0.5kb downstream 39264 true AmTr_v1.0_scaffold00032: 4692923-4732186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 4692923-4693422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 1.0kb upstream 1.0kb upstream 39764 true AmTr_v1.0_scaffold00032: 4693423-4733186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 4732187-4733186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 1.0kb downstream 1.0kb downstream 39764 true AmTr_v1.0_scaffold00032: 4692423-4732186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 4692423-4693422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 2.0kb upstream 2.0kb upstream 40764 true AmTr_v1.0_scaffold00032: 4693423-4734186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 4732187-4734186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 2.0kb downstream 2.0kb downstream 40764 true AmTr_v1.0_scaffold00032: 4691423-4732186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 4691423-4693422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 5.0kb upstream 5.0kb upstream 43764 true AmTr_v1.0_scaffold00032: 4693423-4737186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 4732187-4737186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 5.0kb downstream 5.0kb downstream 43764 true AmTr_v1.0_scaffold00032: 4688423-4732186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 4688423-4693422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 10.0kb upstream 10.0kb upstream 48764 true AmTr_v1.0_scaffold00032: 4693423-4742186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 4732187-4742186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 10.0kb downstream 10.0kb downstream 48764 true AmTr_v1.0_scaffold00032: 4683423-4732186 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.239 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 4683423-4693422 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041391 5273 Angiosperm View MSA
121345968 5274 Embryophyte View MSA
123425658 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain