Gene : evm_27.TU.AmTr_v1.0_scaffold00032.196 A. trichopoda v1.0
Defline:  (1 of 1) 2.1.1.191 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase / rRNA large subunit methyltransferase I Genomic Order:  196
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00032.196 Secondary Identifier:  ? PAC:31560181
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00032.196 0.5kb upstream 0.5kb upstream 12778 true AmTr_v1.0_scaffold00032: 3879818-3892595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00032: 3879818-3880317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 0.5kb downstream 0.5kb downstream 12778 true AmTr_v1.0_scaffold00032: 3880318-3893095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00032: 3892596-3893095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 1.0kb upstream 1.0kb upstream 13278 true AmTr_v1.0_scaffold00032: 3879318-3892595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00032: 3879318-3880317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 1.0kb downstream 1.0kb downstream 13278 true AmTr_v1.0_scaffold00032: 3880318-3893595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00032: 3892596-3893595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 2.0kb upstream 2.0kb upstream 14278 true AmTr_v1.0_scaffold00032: 3878318-3892595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00032: 3878318-3880317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 2.0kb downstream 2.0kb downstream 14278 true AmTr_v1.0_scaffold00032: 3880318-3894595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00032: 3892596-3894595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 5.0kb upstream 5.0kb upstream 17278 true AmTr_v1.0_scaffold00032: 3875318-3892595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00032: 3875318-3880317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 5.0kb downstream 5.0kb downstream 17278 true AmTr_v1.0_scaffold00032: 3880318-3897595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00032: 3892596-3897595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 10.0kb upstream 10.0kb upstream 22278 true AmTr_v1.0_scaffold00032: 3870318-3892595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00032: 3870318-3880317 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 10.0kb downstream 10.0kb downstream 22278 true AmTr_v1.0_scaffold00032: 3880318-3902595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00032.196 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00032: 3892596-3902595 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042200 5273 Angiosperm View MSA
121348163 5274 Embryophyte View MSA
123426103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain