Gene : evm_27.TU.AmTr_v1.0_scaffold00031.57 A. trichopoda v1.0
Defline:  (1 of 9) PTHR11064 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  56
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00031.57 Secondary Identifier:  ? PAC:31551794
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00031.57 0.5kb upstream 0.5kb upstream 8683 true AmTr_v1.0_scaffold00031: 1879732-1888414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00031: 1879732-1880231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 0.5kb downstream 0.5kb downstream 8683 true AmTr_v1.0_scaffold00031: 1880232-1888914 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00031: 1888415-1888914 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 1.0kb upstream 1.0kb upstream 9183 true AmTr_v1.0_scaffold00031: 1879232-1888414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00031: 1879232-1880231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 1.0kb downstream 1.0kb downstream 9183 true AmTr_v1.0_scaffold00031: 1880232-1889414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00031: 1888415-1889414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 2.0kb upstream 2.0kb upstream 10183 true AmTr_v1.0_scaffold00031: 1878232-1888414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00031: 1878232-1880231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 2.0kb downstream 2.0kb downstream 10183 true AmTr_v1.0_scaffold00031: 1880232-1890414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00031: 1888415-1890414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 5.0kb upstream 5.0kb upstream 13183 true AmTr_v1.0_scaffold00031: 1875232-1888414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00031: 1875232-1880231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 5.0kb downstream 5.0kb downstream 13183 true AmTr_v1.0_scaffold00031: 1880232-1893414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00031: 1888415-1893414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 10.0kb upstream 10.0kb upstream 18183 true AmTr_v1.0_scaffold00031: 1870232-1888414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00031: 1870232-1880231 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 10.0kb downstream 10.0kb downstream 18183 true AmTr_v1.0_scaffold00031: 1880232-1898414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00031.57 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00031: 1888415-1898414 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048157 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121348277 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain