Gene : evm_27.TU.AmTr_v1.0_scaffold00030.199 A. trichopoda v1.0
Defline:  (1 of 2) 3.4.24.64 - Mitochondrial processing peptidase / Processing enhancing peptidase Genomic Order:  197
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00030.199 Secondary Identifier:  ? PAC:31556638
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-7279 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00030.199 0.5kb upstream 0.5kb upstream 12978 true AmTr_v1.0_scaffold00030: 5247891-5260868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00030: 5247891-5248390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 0.5kb downstream 0.5kb downstream 12978 true AmTr_v1.0_scaffold00030: 5248391-5261368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00030: 5260869-5261368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 1.0kb upstream 1.0kb upstream 13478 true AmTr_v1.0_scaffold00030: 5247391-5260868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00030: 5247391-5248390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 1.0kb downstream 1.0kb downstream 13478 true AmTr_v1.0_scaffold00030: 5248391-5261868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00030: 5260869-5261868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 2.0kb upstream 2.0kb upstream 14478 true AmTr_v1.0_scaffold00030: 5246391-5260868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00030: 5246391-5248390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 2.0kb downstream 2.0kb downstream 14478 true AmTr_v1.0_scaffold00030: 5248391-5262868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00030: 5260869-5262868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 5.0kb upstream 5.0kb upstream 17478 true AmTr_v1.0_scaffold00030: 5243391-5260868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00030: 5243391-5248390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 5.0kb downstream 5.0kb downstream 17478 true AmTr_v1.0_scaffold00030: 5248391-5265868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00030: 5260869-5265868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 10.0kb upstream 10.0kb upstream 22478 true AmTr_v1.0_scaffold00030: 5238391-5260868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00030: 5238391-5248390 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 10.0kb downstream 10.0kb downstream 22478 true AmTr_v1.0_scaffold00030: 5248391-5270868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.199 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00030: 5260869-5270868 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050410 5273 Angiosperm View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain