Gene : evm_27.TU.AmTr_v1.0_scaffold00030.39 A. trichopoda v1.0
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00030.39 Secondary Identifier:  ? PAC:31556574
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-162 Amborella trichopoda pathologic  
Atrichopoda PWY-5686 Amborella trichopoda pathologic  
Atrichopoda PWY-7211 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00030.39 0.5kb upstream 0.5kb upstream 5439 true AmTr_v1.0_scaffold00030: 1078022-1083460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00030: 1082961-1083460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 0.5kb downstream 0.5kb downstream 5439 true AmTr_v1.0_scaffold00030: 1077522-1082960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00030: 1077522-1078021 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 1.0kb upstream 1.0kb upstream 5939 true AmTr_v1.0_scaffold00030: 1078022-1083960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00030: 1082961-1083960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 1.0kb downstream 1.0kb downstream 5939 true AmTr_v1.0_scaffold00030: 1077022-1082960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00030: 1077022-1078021 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 2.0kb upstream 2.0kb upstream 6939 true AmTr_v1.0_scaffold00030: 1078022-1084960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00030: 1082961-1084960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 2.0kb downstream 2.0kb downstream 6939 true AmTr_v1.0_scaffold00030: 1076022-1082960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00030: 1076022-1078021 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 5.0kb upstream 5.0kb upstream 9939 true AmTr_v1.0_scaffold00030: 1078022-1087960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00030: 1082961-1087960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 5.0kb downstream 5.0kb downstream 9939 true AmTr_v1.0_scaffold00030: 1073022-1082960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00030: 1073022-1078021 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 10.0kb upstream 10.0kb upstream 14939 true AmTr_v1.0_scaffold00030: 1078022-1092960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00030: 1082961-1092960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 10.0kb downstream 10.0kb downstream 14939 true AmTr_v1.0_scaffold00030: 1068022-1082960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.39 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00030: 1068022-1078021 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain