Gene : evm_27.TU.AmTr_v1.0_scaffold00029.45 A. trichopoda v1.0
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  45
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.45 Secondary Identifier:  ? PAC:31550111
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6012-1 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.45 0.5kb upstream 0.5kb upstream 3016 true AmTr_v1.0_scaffold00029: 523937-526952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 526453-526952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 0.5kb downstream 0.5kb downstream 3016 true AmTr_v1.0_scaffold00029: 523437-526452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 523437-523936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 1.0kb upstream 1.0kb upstream 3516 true AmTr_v1.0_scaffold00029: 523937-527452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 526453-527452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 1.0kb downstream 1.0kb downstream 3516 true AmTr_v1.0_scaffold00029: 522937-526452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 522937-523936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 2.0kb upstream 2.0kb upstream 4516 true AmTr_v1.0_scaffold00029: 523937-528452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 526453-528452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 2.0kb downstream 2.0kb downstream 4516 true AmTr_v1.0_scaffold00029: 521937-526452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 521937-523936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 5.0kb upstream 5.0kb upstream 7516 true AmTr_v1.0_scaffold00029: 523937-531452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 526453-531452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 5.0kb downstream 5.0kb downstream 7516 true AmTr_v1.0_scaffold00029: 518937-526452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 518937-523936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 10.0kb upstream 10.0kb upstream 12516 true AmTr_v1.0_scaffold00029: 523937-536452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 526453-536452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 10.0kb downstream 10.0kb downstream 12516 true AmTr_v1.0_scaffold00029: 513937-526452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.45 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 513937-523936 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain